# Python
__pycache__/
*.py[cod]
*$py.class
*.so
.Python

# Virtual Environment
.venv/
venv/
ENV/
env/

# IDE
.vscode/
.idea/
*.swp
*.swo
*~

# Logs
*.log
logs/

# OS
.DS_Store
Thumbs.db

# Data files
data/
output/
logs/

# Configuration files (entire directory)
config/

# Neo4j (entire directory)
neo4j/

# Ontology files
ontology/

# Documentation
*.md

# Batch files
*.bat

# Jupyter
.ipynb_checkpoints/
*.ipynb

# Testing
.pytest_cache/
.coverage
htmlcov/
.tox/